Insertion junction: CLIP2.035140_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035140
Chromosome:chromosome 3
Location:4049417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171950 PPC2,PEPC2 (1 of 2) K01595 - phosphoenolpyruvate carboxylase (ppc); Phosphoenolpyruvate carboxylase 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGGCAGGCAGGAGGTGAAGCACAGCGCCAGTCTCAGGATTGGTTTCG
Internal bar code:GTATATCCTATCTCTACCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:297
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGACCCAAACCAACCAACCA
Suggested primer 2:CACGGGCTTTCGTTTCGTTT