Insertion junction: CLIP2.035142_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035142
Chromosome:chromosome 10
Location:6457302
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464950 (1 of 1) K15201 - general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) (GTP3C3, TFC4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGGTCCACGGCATCATCGCTATCGTCGCCTGCGTCGTGGCCAGCAGCG
Internal bar code:CAGGGCGTAAGGCGCAGTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:296
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGAATCTGGATCCGGACCTG
Suggested primer 2:GTACACGCACACACACACAC