Insertion junction: CLIP2.035146_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035146
Chromosome:chromosome 16
Location:4797643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687600 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGGTTTATGTGCTCGTATGGTGCACTGCATCCACGTGCGTTGTTTGT
Internal bar code:TGGAGTAGGTTACCAAAAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4252
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACTGCACGGTGTGGAAG
Suggested primer 2:GACGAGTACGAGGAGCTGTG