Insertion junction: CLIP2.035146_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035146
Chromosome:chromosome 16
Location:4797666
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687600 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCGCGGGACTGCGCTGTGTCGTTGCGCGCACGCAGGATACTCTAGGAT
Internal bar code:TGGAGTAGGTTACCAAAAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1268
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GACGAGTACGAGGAGCTGTG
Suggested primer 2:AGTACTGCACGGTGTGGAAG