Insertion junction: CLIP2.035151_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035151
Chromosome:chromosome 6
Location:2180420
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g266350 (1 of 1) PF00400//PF01753//PF12937 - WD domain, G-beta repeat (WD40) // MYND finger (zf-MYND) // F-box-like (F-box-like) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGATGAGGTAAGGTTGGTTGTAATTCAGCCTTGCGCGCACGCCCTCTC
Internal bar code:TTCTCACAAAGCTTGACTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2258
LEAP-Seq percent confirming:96.0784
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCAGTAGAGCACGTCGG
Suggested primer 2:ATCTGACCCTGTTCAGCAGC