Insertion junction: CLIP2.035155_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035155
Chromosome:chromosome 5
Location:2118307
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236907 (1 of 1) IPR000572//IPR014720 - Oxidoreductase, molybdopterin-binding domain // Double-stranded RNA-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGCCGCAGCCGACACCGCAACAGCAGCGACCACCATCACCGCTAGAG
Internal bar code:ATGATTGTGTACTGGCGGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3956
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGCGGTGGATAGTAGTG
Suggested primer 2:ATTGTGCCATGACCCTCTGG