Insertion junction: CLIP2.035156_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035156
Chromosome:chromosome 10
Location:3890972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446400 VPS4,KATL1,KAT3,KAT2 (1 of 1) PTHR23074//PTHR23074:SF78 - AAA ATPASE // KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2; Katanin like protein 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGATTGTGTTTGGAGTAAGCTACCCACCGCCACAACCCCGCTCAGGGC
Internal bar code:GGTCTGGGTAGTGTGTATGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1644
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAAGCCGTTCATGATGCG
Suggested primer 2:TGCATGCCAGTTTGAACGTG