Insertion junction: CLIP2.035160_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035160
Chromosome:chromosome 11
Location:3276773
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476376 FAP221,Pcdp1,RPC82 Flagellar Associated Protein 221; (1 of 1) PTHR23053//PTHR23053:SF21 - DLEC1 DELETED IN LUNG AND ESOPHAGEAL CANCER 1 // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCGCTTGCCCCACCCCTACCTGTATGGTATTGACCTCCCTCTCAACC
Internal bar code:CACGACGTACCGCCGTCAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1159
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCGAGAGGGATTGGGAG
Suggested primer 2:ACGAGTGTGTGTGTGTGTGT