Insertion junction: CLIP2.035162_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035162
Chromosome:chromosome 1
Location:1732377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009575 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTGGCTGGGCGGCACCGGCGCCAGAAAGCTCCGACCCAAAAGCTGTC
Internal bar code:CAGGGTATTAGAGTACGACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1015
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCTTCATCACGCCACCAC
Suggested primer 2:GTCCTCATCAGCCTCGGATG