Insertion junction: CLIP2.035167_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035167
Chromosome:chromosome 7
Location:6135570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355800 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTGATGACTTCCCACTATGTCAACACGCACCTGCTTTCACCAGTGTG
Internal bar code:GTAAAGTCCGAAGTTATTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1288
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTACGCACATCCAAACGA
Suggested primer 2:CCCCACTCGTACTGGAGGTA