Insertion junction: CLIP2.035168_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035168
Chromosome:chromosome 5
Location:3003572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230800 (1 of 1) PF00176//PF07496 - SNF2 family N-terminal domain (SNF2_N) // CW-type Zinc Finger (zf-CW) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCAGCCGGCCAGCACCCACCAGGCGCGCTGCCGCCACCACCACCTCCT
Internal bar code:ATCATAGCACTAGGGAGATGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:788
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGCGTTCGCGTAATGTG
Suggested primer 2:CCTTATCCCGCAGTAGCCAG