Insertion junction: CLIP2.035169_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035169
Chromosome:chromosome 17
Location:3721721
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726150 (1 of 1) PTHR23073:SF29 - P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCCGATCACCACCGTCTTCTTGGTCTCCGCGTCGAAGCCCTCCATC
Internal bar code:AATAGGTTGACCTATAACAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:506
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAAACGGGGCATATGTGT
Suggested primer 2:ACCAGCCCAAACTCAACCAA