Insertion junction: CLIP2.035170_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035170
Chromosome:chromosome 10
Location:2386581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g434950 (1 of 1) PF05010 - Transforming acidic coiled-coil-containing protein (TACC) (TACC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGAGATTTGGGTTTGGTAGATTGCGACGGCAACAAGGAGCAGCAGCGT
Internal bar code:TCCCGTTGACCGTTTTTCATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1157
LEAP-Seq percent confirming:91.1111
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GGATCTCAGCGAGAAGGAGC
Suggested primer 2:TCTTTTCCTCCAGCGTGACC