Insertion junction: CLIP2.035178_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035178
Chromosome:chromosome 11
Location:2067083
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467757 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCACCGCCGCCGTTGCGGCCATCCTGCTCCTGCTCACCACCCCCGC
Internal bar code:GAAGCGGGTAGATCTCATGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:894
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GGAACCGCAAGCAATAGCAG
Suggested primer 2:ATCCAGAAGCGGAGGCAGTA