Insertion junction: CLIP2.035181_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035181
Chromosome:chromosome 9
Location:5245476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407100 MRPS5,uS5m Mitochondrial ribosomal protein S5; (1 of 1) PTHR13718:SF61 - 28S RIBOSOMAL PROTEIN S5, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTACGCCCCCTCCACGCACCCCCCAAACCCCATCCGCCGCATCCATCC
Internal bar code:CTGTTATCCATAAATCAATCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1201
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGCGTAAACACATCGGT
Suggested primer 2:TCACCGTGTAAACAGCTCCC