Insertion junction: CLIP2.035181_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035181
Chromosome:chromosome 9
Location:5245477
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407100 MRPS5,uS5m Mitochondrial ribosomal protein S5; (1 of 1) PTHR13718:SF61 - 28S RIBOSOMAL PROTEIN S5, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGAAACGAAGGGTGGGGCCAGAGGCCAGCTTGTGCTGTTTTGAAAGG
Internal bar code:CTGTTATCCATAAATCAATCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1093
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCGTGTAAACAGCTCCC
Suggested primer 2:AGGTGCGTAAACACATCGGT