Insertion junction: CLIP2.035190_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035190
Chromosome:chromosome 15
Location:1275090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801727 NCL66 Nuclear Control of chloroplast-Like 66; (1 of 39) PF08373 - RAP domain (RAP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACAACCTGTGGGCCCTAGAGGTCCTTGGCTGCACCGGACCGGCGTTT
Internal bar code:GTGATAATCGGGTAGCGATCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4111
LEAP-Seq percent confirming:98.6111
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGTCTGAAACCCCTGAC
Suggested primer 2:CGCACCTCCTTAGCTCGTAG