Insertion junction: CLIP2.035196_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035196
Chromosome:chromosome 11
Location:38191
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467524 (1 of 1) 3.6.1.45 - UDP-sugar diphosphatase / UDP-sugar pyrophosphatase 5'UTR
Cre11.g467525 (1 of 18) PF12937 - F-box-like (F-box-like) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAGACGAGCGTCCGGCCCAAACATACTTAGGCTGGCAGCGAGCTCCG
Internal bar code:AAGGGTATATGGGTATTAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3369
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTTTCCACTGCCCACAA
Suggested primer 2:ATCATTTCCAATGCCGCAGC