Insertion junction: CLIP2.035203_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035203
Chromosome:chromosome 2
Location:327409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g075150 RPB2 (1 of 1) K03010 - DNA-directed RNA polymerase II subunit RPB2 (RPB2, POLR2B); DNA-directed RNA polymerase II, 135 kDa polypeptide intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGCCCCCAGCCCTCACCCCCACCCACCCGCTGTACCCCGAGCTCCAC
Internal bar code:ATAGGTCAGCGAACGCGGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:169
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGAGAAGACGGAGACCT
Suggested primer 2:GTGGGTAGGTGGGGTGATTG