Insertion junction: CLIP2.035204_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035204
Chromosome:chromosome 1
Location:5528739
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039400 (1 of 1) 3.8.1.5 - Haloalkane dehalogenase / 1-chlorohexane halidohydrolase CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTGCATGTGGTCCAACGACGCGTTGCATTGGTCCATAAGCAAGGAGG
Internal bar code:ATGCTTGGACTTACCCTAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1940
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AACTACCGGGTAAGCAAGCC
Suggested primer 2:ACACACTGCACATCCGCTTA