Insertion junction: CLIP2.035228_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035228
Chromosome:chromosome 12
Location:8516292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549400 (1 of 4) PF09366 - Protein of unknown function (DUF1997) (DUF1997) intron
Cre12.g801481 (1 of 1) IPR000104//IPR003072//IPR018971 - Antifreeze protein, type I // Orphan nuclear receptor, NOR1 type // Protein of unknown function DUF1997 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCAGAGTCCGGCCTCATGCCCTCTACACGCGCCGCAGCAGGCGCCG
Internal bar code:GTAATTGTAGGCTTATCTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1366
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCATCCTCGTCTGAGTCT
Suggested primer 2:CACCAATCCCGAACCACTCA