Insertion junction: CLIP2.035232_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035232
Chromosome:chromosome 1
Location:2669411
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016100 (1 of 7) IPR011048 - Cytochrome cd1-nitrite reductase-like, haem d1 domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTTTACGAGGGCGGGCGTCATGTTCCTAATGCCCACACATGCCCACC
Internal bar code:CTAACGTGGGCGTGGCCCCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3507
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTTCGTCTCTATCTCGC
Suggested primer 2:ATCGATACCGTGCGTGGTAC