Insertion junction: CLIP2.035232_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035232
Chromosome:chromosome 1
Location:2669415
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016100 (1 of 7) IPR011048 - Cytochrome cd1-nitrite reductase-like, haem d1 domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCCATGCAAACAATCCCTCGGCCCCGGTCGTCCCACAGCCAACCCCG
Internal bar code:TTTTGTACGTATGCATTGATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:955
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGATACCGTGCGTGGTAC
Suggested primer 2:TGCGTTCGTCTCTATCTCGC