Insertion junction: CLIP2.035237_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035237
Chromosome:chromosome 6
Location:1514153
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g260700 XUV1,UAPA6 (1 of 2) K06901 - putative MFS transporter, AGZA family, xanthine/uracil permease (pbuG); Xanthine/uracil/vitamin C permease-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCATTCAACTAGACCCGCCCAAAGTCAGGTGCAGCCGTGCACGCCCC
Internal bar code:TGGAAACGTTAATTCGGCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1364
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACTAGATAGGAAGCGTGCGC
Suggested primer 2:GCCAGTCTGACACTCAAGCT