Insertion junction: CLIP2.035237_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035237
Chromosome:chromosome 6
Location:1514197
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g260700 XUV1,UAPA6 (1 of 2) K06901 - putative MFS transporter, AGZA family, xanthine/uracil permease (pbuG); Xanthine/uracil/vitamin C permease-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTTGAGGTAACCAACGTCCATTCCGGTGCCTGCACGTGTACGAGCGG
Internal bar code:CTCGCAAATAGATCCTTTAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2107
LEAP-Seq percent confirming:92.6829
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGTCTGACACTCAAGCT
Suggested primer 2:ACTAGATAGGAAGCGTGCGC