Insertion junction: CLIP2.035247_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035247
Chromosome:chromosome 8
Location:2949417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g374700 FAP244 (1 of 2) PTHR14885:SF1 - WD REPEAT-CONTAINING PROTEIN 96; Flagellar Associated Protein 244 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCCCCCTCCCCCTCGCCTCCCCAGGACGAGGACGATGAGGCCGAGCT
Internal bar code:AAGTGATGTTGATGGATGGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:226
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCCACATGAACGCCTCC
Suggested primer 2:ATCTTCCTCCCCCTTCCCTC