Insertion junction: CLIP2.035257_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035257
Chromosome:chromosome 11
Location:2668658
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095075 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCCTGGAGAAGATGGCGCAGTGGGAGTGCATCGTGGTTAAGAACTAT
Internal bar code:TTGGCTAGCCTCATCCGGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:624
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGATGTGTTGCTGACCC
Suggested primer 2:CATCAAGTGGCGGAGTCTGT