Insertion junction: CLIP2.035260_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035260
Chromosome:chromosome 13
Location:864350
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567400 PDE16 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGGTGCGTGTGGCTCCCACACACGGCTGGGCCCGGCCCTGGTATGCG
Internal bar code:TCACGTTAGAGTTAAATTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:819
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCACAAAGCTTTTCGCGT
Suggested primer 2:TGCCAATCAAACTTGCTCGC