Insertion junction: CLIP2.035262_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035262
Chromosome:chromosome 17
Location:1870790
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709550 (1 of 2) K06709 - jumonji domain-containing protein 2 [EC:1.14.11.-] (JMJD2, JHDM3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCACGTCAAACTCCTCCCGCGAGGGCCGGAAGACGGGGCACATGGCCC
Internal bar code:GTCTAGCAGTATCTTATCTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4361
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCGGTAATACACGTGTTC
Suggested primer 2:CAGTCCCGCTCCTCCATAAC