Insertion junction: CLIP2.035267_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035267
Chromosome:chromosome 10
Location:4142350
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448750 GT90F21,GT90-21 (1 of 11) 2.4.2.26 - Protein xylosyltransferase / Uridine diphosphoxylose-protein xylosyltransferase; GT90 family protein 21 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGTGGCAGGTGGGTGGATGGGTGAGTGGGCGGGGCGGGGGCGGGGCCT
Internal bar code:CAGGGAAGGGGGGACGAATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1810
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CACCATGGCTCATCCCACTT
Suggested primer 2:AACTATGAAGGGGCCAACGG