Insertion junction: CLIP2.035274_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035274
Chromosome:chromosome 7
Location:5219302
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349100 HEL39 ATP-dependent RNA helicase; (1 of 1) K12813 - pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 (DHX16) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACGGCTGGGCGGAGAGCAACTTCAGCACGCAGTGGTGCTTCGAGAAC
Internal bar code:GGTGTGGATCATTCTAACCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:550
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTCTTGATGGTGCGGTA
Suggested primer 2:GGATGGTTGGGTTCTCGTGT