Insertion junction: CLIP2.035277_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035277
Chromosome:chromosome 6
Location:3411806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278095 (1 of 1) IPR016024//IPR027417 - Armadillo-type fold // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCACACACACCTTGGTCTGGAACTCCACCTCGGCGTGGTAAGCGCCC
Internal bar code:GATTCATCCCGGCAGTTGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3304
LEAP-Seq percent confirming:97.1831
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:AGTATCGACGACGTTACGGC
Suggested primer 2:CAGAAGGAAGGGGAAGGCAG