Insertion junction: CLIP2.035277_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035277
Chromosome:chromosome 6
Location:3411995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278095 (1 of 1) IPR016024//IPR027417 - Armadillo-type fold // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTGGCACAGGTGCGTATGCGTCTCCGCGCATGGGCGTATCAGCCGCG
Internal bar code:CGACTGAAAGAATATCCAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:6081
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAAGGAAGGGGAAGGCAG
Suggested primer 2:AGTATCGACGACGTTACGGC