Insertion junction: CLIP2.035279_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035279
Chromosome:chromosome 5
Location:2849629
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241350 (1 of 1) 3.6.3.36 - Taurine-transporting ATPase intron
lncRNA_TCONS_00173624 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCGGGTCATAGCGGCGCGCGGTGGGCTTCTAAAGTGCACGCCACTGC
Internal bar code:CTGCTGGGTAGTCCCGTTTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1882
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGGAGAGGGGTTCCAG
Suggested primer 2:GTGTCAAGCAAGCACCAAGG