Insertion junction: CLIP2.035279_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035279
Chromosome:chromosome 5
Location:2859405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241350 (1 of 1) 3.6.3.36 - Taurine-transporting ATPase intron
lncRNA_TCONS_00173624 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGCATGCGATCGGCTGACGCCGCGGCCGCCTGCAGGTCGGGCGTGCC
Internal bar code:TCCACTTAAACTCTTTACGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1906
LEAP-Seq percent confirming:41.1765
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCAAGCAAGCACCAAGG
Suggested primer 2:GTGTTGGAGAGGGGTTCCAG