Insertion junction: CLIP2.035283_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035283
Chromosome:chromosome 16
Location:4658682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667451 TLP3,CAV6 Tubby-like protein; (1 of 5) PTHR10037//PTHR10037:SF62 - VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM // SODIUM CHANNEL PROTEIN PARA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAACACTCATGAATGTGACCCCCCCCCGGCCCCCGCAGACGCTGACG
Internal bar code:GCGTGGGGCTAGTTATGTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2348
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCACATTCTCAACACCGG
Suggested primer 2:GATCGCGTCCATGCTACTCA