Insertion junction: CLIP2.035288_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035288
Chromosome:chromosome 5
Location:2831926
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241250 (1 of 1) IPR000104//IPR000253//IPR001357 - Antifreeze protein, type I // Forkhead-associated (FHA) domain // BRCT domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGTCGGTTGGCAGCCTGCGGTCTTTGTGGCAGCAGCGGCAGGAGGAG
Internal bar code:GCTTATTGTGTTAGCCTCTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2046
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CATCTCCCTCCACGTCATCG
Suggested primer 2:TGGGAAGAAGAGCTGGAGGA