Insertion junction: CLIP2.035288_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035288
Chromosome:chromosome 5
Location:2831927
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241250 (1 of 1) IPR000104//IPR000253//IPR001357 - Antifreeze protein, type I // Forkhead-associated (FHA) domain // BRCT domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTTGGCCAGCGAGGGCCGGGGCGGCGGCGCGGCAGCGGCCGCCAGCA
Internal bar code:GCTTATTGTGTTAGCCTCTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:862
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGAAGAAGAGCTGGAGGA
Suggested primer 2:CATCTCCCTCCACGTCATCG