Insertion junction: CLIP2.035294_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035294
Chromosome:chromosome 9
Location:4074825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399104 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCAGGAAGGTCAGTGGGTACTCGCACGAGAGCATGCGCGACCCCGGTT
Internal bar code:ATCTGTTGTTGGGGGTTGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1993
LEAP-Seq percent confirming:96.3636
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGCAGTGCAGGTAGTCA
Suggested primer 2:TGAGGCAGGCAATACCCAAG