Insertion junction: CLIP2.035298_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035298
Chromosome:chromosome 16
Location:7987066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691776 (1 of 2) K03145 - transcription elongation factor S-II (TFIIS) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGTTCATGCTGTCAAACCCCATTCTTTTGAATGATCAGCTTATTTAA
Internal bar code:AGACGTTGAAGTTTTAGATTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:816
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTCAACAGCAGCAGGAGT
Suggested primer 2:CGCAACCCGCATATCACAAG