Insertion junction: CLIP2.035301_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035301
Chromosome:chromosome 17
Location:1675362
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708000 FAP260 Membrane-associated Flagellar Associated Protein 260; (1 of 11) PF13426 - PAS domain (PAS_9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCAGAACAACTACCAGTCGGGCGTGACACAGCTTCAGCAGGCCAAGAA
Internal bar code:CCTCGGGGGTTTGTGAGGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4667
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:112

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTCTTGCCCTCCAGCTC
Suggested primer 2:CGCTGGCGAGTTAAGAATGC