Insertion junction: CLIP2.035305_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035305
Chromosome:chromosome 9
Location:4389694
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400330 ALK6 Aurora-like kinase; (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTCTCGCCAGGAAATTCGGGGGTCATCCGCCATAGCTGCAGGATGCC
Internal bar code:GGAGGTGGTGGGCTGAGGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1001
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATGATGCCCTGAGAGGA
Suggested primer 2:CAAGCTGAGCGTGTTGAACC