Insertion junction: CLIP2.035310_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035310
Chromosome:chromosome 1
Location:5080752
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035450 (1 of 1) PTHR23291:SF36 - PROTEIN XBX-6, ISOFORM B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAAGGATGCCCGAGCGCTTCGAGCTTGTTGCACGGAGACCTGCAGCTCC
Internal bar code:GCAGTGTCCACTCGGATTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1135
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTCCATGTACGGCTACC
Suggested primer 2:AACTGAAAGCGTTCGCACAC