Insertion junction: CLIP2.035318_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035318
Chromosome:chromosome 2
Location:6963971
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389282 PF6-IP3,C1a-32,FAP114 (1 of 2) PF14769 - Flagellar C1a complex subunit C1a-32 (CLAMP); Coiled-Coil Flagellar Associated Protein 114 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCGGCCTCACACTCCACCGCGCCCCGCTCCCACGTCGCCCGCTGTGC
Internal bar code:TTGGTTGTCTTTCCATAATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1585
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGAACTAACCGGGGGCATTG
Suggested primer 2:ACATGCATCAGTGAGCAGCT