Insertion junction: CLIP2.035319_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035319
Chromosome:chromosome 12
Location:2393712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507750 (1 of 1) PF00069//PF07714//PF13637 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (many copies) (Ank_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACGTGTTCAAGGGTTTTGTCTGTTGGGGTACAGATGCGGGCTGGGAA
Internal bar code:GCCAGCAAGGACTCGACTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1446
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGCGACTTGGACAGACC
Suggested primer 2:ATGAAGTGAAGTGCCGACGT