Insertion junction: CLIP2.035320_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035320
Chromosome:chromosome 2
Location:5067334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111200 (1 of 1) PTHR10641//PTHR10641:SF492 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB-RELATED PROTEIN A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATCCGCGGCATCGTGCGGCTTCCTCCTAAAAGTATGCTGGACAAGATG
Internal bar code:ACACGGGCCTGCACGTAGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2259
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCCGCCTGATCTTTTGT
Suggested primer 2:TGGTCATATTACTCCGGCGC