Insertion junction: CLIP2.035322_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035322
Chromosome:chromosome 17
Location:4703533
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g732750 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACCTACCCCGCGCACACTGCTGCACAACAGCGCTGTCCCCAAAACCA
Internal bar code:CTAAAAAAGTTGAAGCCTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1717
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGGAGAGGAGCTGGTAA
Suggested primer 2:TCCAAAATCTGAGGCCGCAT