Insertion junction: CLIP2.035347_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035347
Chromosome:chromosome 12
Location:1447115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488351 (1 of 1) IPR001368//IPR009030//IPR011641 - TNFR/NGFR cysteine-rich region // Insulin-like growth factor binding protein, N-terminal // Tyrosine-protein kinase ephrin type A/B receptor-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCACCTCTCAATGCAGCCCCTCGGGAGGTCATCCACAATGCAATGTC
Internal bar code:TGTAGTTTTCTTCATGTTCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:364
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGTGAGGGGCTGGGAGAG
Suggested primer 2:CAACTGTGTCAACTGTGCGG