Insertion junction: CLIP2.035350_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035350
Chromosome:chromosome 3
Location:3101293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164350 (1 of 1) K06130 - lysophospholipase II (LYPLA2) intron
Cre03.g800314 (1 of 77) IPR001623 - DnaJ domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTAGGGCCAGGCGTTACGTGCTGCCTGCGGCGAGTTGCGCATACTGC
Internal bar code:CCACGCGATGATAATACCAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1181
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTCAACAGTTGTGCACC
Suggested primer 2:CCTCCGACTATCCCTTTGGC