Insertion junction: CLIP2.035350_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035350
Chromosome:chromosome 3
Location:3109449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164350 (1 of 1) K06130 - lysophospholipase II (LYPLA2) intron
Cre03.g800314 (1 of 77) IPR001623 - DnaJ domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGGGATGTGTGCGGTTGACGAGGTCGAAGGCGGCACGCATGTTGAAC
Internal bar code:AATGATTGCTAAGGTGTGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3689
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCGACTATCCCTTTGGC
Suggested primer 2:GACGTCAACAGTTGTGCACC